Co-expression analysis

Gene ID	1617496_s_at
Gene name	hypothetical protein LOC100247953
Homology with Arabidopsis	Similar to At3g12570: FYD (HF=7e-25)
Module size	6 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	79.4	0.96	1617496_s_at	BQ797047	hypothetical protein LOC100247953	-	7e-25	At3g12570	FYD	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1610213_at	BQ798061	similar to somatic embryogenesis receptor-like kinase 3	-	8e-11	At4g33430	BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1614078_at	BQ799834	hypothetical protein LOC100254432	-	7e-31	At2g37570	SLT1 (sodium- and lithium-tolerant 1)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1608185_at	CB341695	-	-	6e+0	At3g53990	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1621974_at	CB971118	hypothetical protein LOC100262951	-	6e-1	At3g57750	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1621012_s_at	CB980121	hypothetical protein LOC100263999	-	5e-31	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.7	96.2	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.3	95.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.1	94.6	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.1	94.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.0	94.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.9	93.8	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.8	93.4	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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