Co-expression analysis

Gene ID	1617484_s_at
Gene name
Homology with Arabidopsis	Similar to At5g54630: zinc finger protein-related (HF=9e-1)
Module size	11 genes
NF	0.56
%ile	82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.74	91.0	0.93	1617484_s_at	CB003457	-	-	9e-1	At5g54630	zinc finger protein-related	O.I.	H.G.	S.X.	Please select
0.70	88.6	0.95	1615673_at	CF215772	hypothetical protein LOC100253775	-	2e+0	At5g16650	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.64	84.7	0.94	1619199_at	CB004028	hypothetical protein LOC100248130	-	2e+0	At4g29430	rps15ae (ribosomal protein S15A E)	O.I.	H.G.	S.X.	Please select
0.58	79.8	0.95	1621701_at	BQ794940	hypothetical LOC100245420	-	1e+0	At5g38320	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.96	1613337_x_at	CF204544.1	-	-	3e-1	At4g28703	-	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.96	1616436_at	CF516544	-	-	5e+0	At4g13060	F-box family protein-related	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.95	1620373_at	BQ793176	-	-	5e-6	At1g50320	ATHX	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.95	1617301_at	CF514880	-	-	4e+0	At5g06040	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1620107_at	CF518921	-	-	4e+0	At1g74930	ORA47	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.96	1619646_at	CB341424	hypothetical protein LOC100261680	-	4e+0	At5g43960	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.96	1608312_at	CA809526	hypothetical protein LOC100262024	-	5e-18	At3g07880	Rho GDP-dissociation inhibitor family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.7	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.1	94.6	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.5	91.9	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.3	90.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.2	89.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.2	89.9	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.0	88.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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