Co-expression analysis

Gene ID 1617470_s_at
Gene name similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transmembrane transporter
Homology with ArabidopsisSimilar to At1g48640: lysine and histidine specific transporter, putative (HF=6e-11)
Module size 6 genes
NF 0.22
%ile 31.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5375.20.891617470_s_atBQ797931similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transmembrane transporter-6e-11At1g48640lysine and histidine specific transporter, putativeO.I.H.G.S.X.
0.5072.70.911608504_atBQ797231hypothetical protein LOC100255960-5e-1At4g17713-O.I.H.G.S.X.
0.2937.70.901619027_atCA818485--7e-2At4g39250ATRL1 (ARABIDOPSIS RAD-LIKE 1)O.I.H.G.S.X.
0.2022.40.921619513_atCA817243hypothetical protein LOC100247939-4e-7At2g33600cinnamoyl-CoA reductase familyO.I.H.G.S.X.
0.1313.30.911621305_s_atCA814305hypothetical protein LOC100257814-5e-7At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)O.I.H.G.S.X.
0.077.80.921613916_atCF404702hypothetical protein LOC100250922-1e-24At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.498.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.697.6GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.597.5GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.595.7GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.893.4GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.491.3GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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