Co-expression analysis

Gene ID 1617462_at
Gene name
Homology with ArabidopsisSimilar to At1g73410: MYB54 (MYB DOMAIN PROTEIN 54) (HF=5e-2)
Module size 6 genes
NF 0.07
%ile 13.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.851617462_atCB346202--5e-2At1g73410MYB54 (MYB DOMAIN PROTEIN 54)O.I.H.G.S.X.
0.2937.70.971610589_atCB979189hypothetical protein LOC100248961-4e-23At4g38040exostosin family proteinO.I.H.G.S.X.
0.1010.30.971610261_atBQ792431hypothetical protein LOC100261508-6e-2At1g60650glycine-rich RNA-binding protein, putativeO.I.H.G.S.X.
0.077.80.971619480_atCF513488hypothetical protein LOC100242124-2e-16At1g31910GHMP kinase family proteinO.I.H.G.S.X.
0.034.20.971614753_atCF415333hypothetical protein LOC100241307-2e-4At2g43090aconitase C-terminal domain-containing proteinO.I.H.G.S.X.
0.023.20.971621588_atCB982967hypothetical protein LOC100259735-6e-16At2g33470GLTP1 (glycolipid transfer protein 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.591.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.390.7GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.189.1GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
2.088.2GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.987.2GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.987.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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