Co-expression analysis

Gene ID	1617462_at
Gene name
Homology with Arabidopsis	Similar to At1g73410: MYB54 (MYB DOMAIN PROTEIN 54) (HF=5e-2)
Module size	6 genes
NF	0.07
%ile	13.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.85	1617462_at	CB346202	-	-	5e-2	At1g73410	MYB54 (MYB DOMAIN PROTEIN 54)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1610589_at	CB979189	hypothetical protein LOC100248961	-	4e-23	At4g38040	exostosin family protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.97	1610261_at	BQ792431	hypothetical protein LOC100261508	-	6e-2	At1g60650	glycine-rich RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.97	1619480_at	CF513488	hypothetical protein LOC100242124	-	2e-16	At1g31910	GHMP kinase family protein	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.97	1614753_at	CF415333	hypothetical protein LOC100241307	-	2e-4	At2g43090	aconitase C-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.97	1621588_at	CB982967	hypothetical protein LOC100259735	-	6e-16	At2g33470	GLTP1 (glycolipid transfer protein 1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.5	91.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.3	90.7	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.0	88.2	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.9	87.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.9	87.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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