Co-expression analysis

Gene ID 1617444_s_at
Gene name hypothetical protein LOC100243312
Homology with ArabidopsisSimilar to At3g45140: LOX2 (LIPOXYGENASE 2) (HF=3e-4)
Module size 6 genes
NF 0.18
%ile 26.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.90.941617444_s_atCF373801hypothetical protein LOC100243312-3e-4At3g45140LOX2 (LIPOXYGENASE 2)O.I.H.G.S.X.
0.5375.20.931608892_atCF373801hypothetical protein LOC100243312-3e-4At3g45140LOX2 (LIPOXYGENASE 2)O.I.H.G.S.X.
0.5072.70.951622019_s_atCF204368.1hypothetical protein LOC100243312-2e-1At5g39950ATTRX2 (THIOREDOXIN 2)O.I.H.G.S.X.
0.1111.30.951606521_atCF371891hypothetical protein LOC100256590-5e-1At4g37140MEE69 (MATERNAL EFFECT EMBRYO ARREST 69)O.I.H.G.S.X.
0.1111.30.951622645_atCF208259hypothetical protein LOC100245405-1e-83At1g01050AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1)O.I.H.G.S.X. protein LOC100250907-5e-23At3g17940aldose 1-epimerase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
3.094.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.893.4GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.591.9GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.491.3GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.289.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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