Co-expression analysis

Gene ID 1617386_at
Gene name hypothetical protein LOC100265283
Homology with ArabidopsisSimilar to At3g02580: STE1 (STEROL 1) (HF=2e-27)
Module size 13 genes
NF 0.51
%ile 76.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.941617386_atCF372270hypothetical protein LOC100265283-2e-27At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.6787.90.961612074_atCB339898similar to kinesin like protein-6e-21At5g51720unknown proteinO.I.H.G.S.X.
0.6787.90.971609736_atCA812857hypothetical protein LOC100248605-6e-6At2g34460flavin reductase-relatedO.I.H.G.S.X.
0.6484.70.961621016_atCA817314similar to transporter-related-3e-10At5g20380PHT4O.I.H.G.S.X.
0.5679.40.971612484_atCF510569hypothetical protein LOC100254359 /// hypothetical protein LOC100267643-7e-8At5g10470kinesin motor protein-relatedO.I.H.G.S.X.
0.5072.70.971622679_atCD798070hypothetical protein LOC100257992-1e-20At5g06220-O.I.H.G.S.X.
0.4868.80.971621073_atCB914439GDP-mannose-3',5'-epimerase-0At5g28840GME (GDP-D-MANNOSE 3',5'-EPIMERASE)O.I.H.G.S.X.
0.4666.50.951609508_atCB976923hypothetical protein LOC100242787-4e-3At5g45960GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.4666.50.971607482_atCB342115--7e-16At5g02790In2-1 protein, putativeO.I.H.G.S.X.
0.4361.50.971616613_atCD009052hypothetical protein LOC100259706-6e-1At4g02920unknown proteinO.I.H.G.S.X.
0.3345.70.971608777_atCB344861hypothetical protein LOC100266496-6e-19At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)O.I.H.G.S.X.
0.3039.40.961612442_atBQ798338--4e+0Atmg00890-O.I.H.G.S.X.
0.2734.00.971615234_atCB342968hypothetical protein LOC100258729-3e-17At1g54350ABC transporter family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.996.6GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.595.7GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.784.7GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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