Co-expression analysis

Gene ID 1617349_at
Gene name hypothetical protein LOC100264419
Homology with ArabidopsisSimilar to Atmg01020: - (HF=4e-1)
Module size 6 genes
NF 0.36
%ile 52.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.90.971617349_atCF203026.1hypothetical protein LOC100264419-4e-1Atmg01020-O.I.H.G.S.X.
0.6787.90.971617152_atCF206449.1--9e-8At1g53710hydrolase/ protein serine/threonine phosphataseO.I.H.G.S.X.
0.4057.70.971616870_atCF202454.1--2e+0At5g46490disease resistance protein (TIR-NBS class), putativeO.I.H.G.S.X.
0.4057.70.971611253_atCD798640--2e-1At1g75060unknown proteinO.I.H.G.S.X.
0.2022.40.971612839_atCF414885hypothetical protein LOC100252266-7e-1At4g32785-O.I.H.G.S.X.
0.1920.90.971618530_atCF513440--4e+0At5g15570-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.799.9GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
12.299.8GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
8.099.3GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
7.199.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.697.6GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.597.5GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
2.692.5GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.692.5GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.591.9GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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