Co-expression analysis

Gene ID	1617345_s_at
Gene name	hypothetical protein LOC100247984
Homology with Arabidopsis	Similar to At1g64720: CP5 (HF=3e-21)
Module size	6 genes
NF	0.63
%ile	90.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1617345_s_at	CF514945	hypothetical protein LOC100247984	-	3e-21	At1g64720	CP5	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1620267_at	CB972336	hypothetical protein LOC100264696	-	7e-9	At5g20140	SOUL heme-binding family protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1612258_at	CD003740	hypothetical LOC100252450	-	8e-22	At1g17220	FUG1 (fu-gaeri1)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1607793_at	CF515792	hypothetical protein LOC100263187	-	9e-11	At5g02120	OHP (ONE HELIX PROTEIN)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1619987_at	CB910180	hypothetical protein LOC100256191	-	9e-17	At1g64860	SIGA (SIGMA FACTOR A)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1622249_at	CA817903	glycolate oxidase-like	-	6e-153	At3g14420	(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.8	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436353	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436382	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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