Co-expression analysis

Gene ID	1617334_s_at
Gene name
Homology with Arabidopsis	Similar to At5g65660: hydroxyproline-rich glycoprotein family protein (HF=1e-9)
Module size	6 genes
NF	0.76
%ile	97.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1617334_s_at	CF607954	-	-	1e-9	At5g65660	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.96	1621244_s_at	CD797552	hypothetical protein LOC100246875	-	2e-5	At3g03980	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.95	1618561_at	CF204500.1	hypothetical protein LOC100246875	-	2e-5	At3g03980	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1606845_at	CF212991	hypothetical protein LOC100257315	-	1e+0	At3g52510	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1616735_at	CF604749	hypothetical protein LOC100257315	-	1e+0	At5g50470	NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7)	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.95	1620319_s_at	CF205531.1	R2R3 Myb14 transcription factor	-	9e-2	At4g11660	AT-HSFB2B	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	97.5	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436378	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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