Co-expression analysis

Gene ID	1617311_at
Gene name	hypothetical protein LOC100257045
Homology with Arabidopsis	Similar to At4g24770: RBP31 (31-KDA RNA BINDING PROTEIN) (HF=1e-16)
Module size	13 genes
NF	0.55
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.95	1617311_at	CB344329	hypothetical protein LOC100257045	-	1e-16	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.85	94.9	0.97	1617425_at	BQ799379	hypothetical protein LOC100242172	-	2e-12	At5g21920	YGGT family protein	O.I.	H.G.	S.X.	Please select
0.85	94.9	0.98	1610525_at	CA814677	hypothetical protein LOC100260680	-	2e-15	At1g50900	-	O.I.	H.G.	S.X.	Please select
0.76	91.5	0.98	1618209_at	CF373021	-	-	3e-17	At4g09010	APX4 (ASCORBATE PEROXIDASE 4)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1608376_at	CF373831	similar to ribosomal protein S17	-	3e-29	At1g48350	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.98	1621285_at	CB347466	hypothetical protein LOC100251632	-	3e-24	At4g01310	ribosomal protein L5 family protein	O.I.	H.G.	S.X.	Please select
0.58	79.8	0.97	1613844_at	CF404099	hypothetical protein LOC100252738	-	1e-17	At3g23570	dienelactone hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.97	1612114_at	BQ797697	hypothetical protein LOC100264713	-	1e+0	At5g60000	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.97	1608391_at	CA817568	hypothetical protein LOC100255376	-	5e-12	At1g60230	radical SAM domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1609873_at	CB341501	hypothetical protein LOC100247523	-	2e-69	At1g67280	lactoylglutathione lyase, putative / glyoxalase I, putative	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1609530_at	CD005027	hypothetical protein LOC100248460	-	1e+0	At2g29180	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.97	1611933_at	CB345450	hypothetical protein LOC100266645	-	2e-6	At3g52150	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1617204_at	CF404742	hypothetical protein LOC100264070	-	2e-21	At2g33800	ribosomal protein S5 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.3	90.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.2	89.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.0	88.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.0	88.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.0	88.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
1.9	87.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.9	87.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.8	86.0	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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