Co-expression analysis

Gene ID 1617311_at
Gene name hypothetical protein LOC100257045
Homology with ArabidopsisSimilar to At4g24770: RBP31 (31-KDA RNA BINDING PROTEIN) (HF=1e-16)
Module size 13 genes
NF 0.55
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.951617311_atCB344329hypothetical protein LOC100257045-1e-16At4g24770RBP31 (31-KDA RNA BINDING PROTEIN)O.I.H.G.S.X.
0.8594.90.971617425_atBQ799379hypothetical protein LOC100242172-2e-12At5g21920YGGT family proteinO.I.H.G.S.X.
0.8594.90.981610525_atCA814677hypothetical protein LOC100260680-2e-15At1g50900-O.I.H.G.S.X.
0.7691.50.981618209_atCF373021--3e-17At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.H.G.S.X.
0.6787.90.971608376_atCF373831similar to ribosomal protein S17-3e-29At1g48350ribosomal protein L18 family proteinO.I.H.G.S.X.
0.5980.60.981621285_atCB347466hypothetical protein LOC100251632-3e-24At4g01310ribosomal protein L5 family proteinO.I.H.G.S.X.
0.5879.80.971613844_atCF404099hypothetical protein LOC100252738-1e-17At3g23570dienelactone hydrolase family proteinO.I.H.G.S.X.
0.5679.40.971612114_atBQ797697hypothetical protein LOC100264713-1e+0At5g60000unknown proteinO.I.H.G.S.X.
0.5273.90.971608391_atCA817568hypothetical protein LOC100255376-5e-12At1g60230radical SAM domain-containing proteinO.I.H.G.S.X.
0.5072.70.981609873_atCB341501hypothetical protein LOC100247523-2e-69At1g67280lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.H.G.S.X.
0.4767.70.981609530_atCD005027hypothetical protein LOC100248460-1e+0At2g29180unknown proteinO.I.H.G.S.X.
0.3853.60.971611933_atCB345450hypothetical protein LOC100266645-2e-6At3g52150RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3243.10.971617204_atCF404742hypothetical protein LOC100264070-2e-21At2g33800ribosomal protein S5 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.390.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.289.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.088.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.088.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.088.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.987.2GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
1.987.2GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
1.886.0GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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