Co-expression analysis

Gene ID	1617273_at
Gene name
Homology with Arabidopsis	Similar to At3g55550: lectin protein kinase, putative (HF=1e-2)
Module size	6 genes
NF	0.02
%ile	3.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.76	1617273_at	AY427140.1	-	-	1e-2	At3g55550	lectin protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.96	1622386_at	BQ794629	hypothetical protein LOC100264172	-	9e-3	At5g44210	ERF9 (ERF DOMAIN PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.96	1621177_at	CF215740	hypothetical protein LOC100258972	-	4e+0	At1g48325	Expressed protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.96	1613809_at	CF372821	hypothetical protein LOC100247494	-	3e-50	At1g69340	appr-1-p processing enzyme family protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.96	1606492_s_at	CF513173	hypothetical protein LOC100245887	-	4e-35	At2g36620	RPL24A (ribosomal protein L24)	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.95	1619367_at	CD799404	hypothetical protein LOC100248974	-	2e-14	At1g61690	phosphoinositide binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM436375	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM436374	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.0	88.2	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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