Co-expression analysis

Gene ID	1617243_at
Gene name
Homology with Arabidopsis	Similar to At5g54855: pollen Ole e 1 allergen and extensin family protein (HF=1e+0)
Module size	6 genes
NF	0.07
%ile	14.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.83	1617243_at	CB343510	-	-	1e+0	At5g54855	pollen Ole e 1 allergen and extensin family protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.94	1614199_at	CB345118	-	-	2e+1	At5g44572	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.94	1614400_at	CF405225	-	-	2e-1	At2g03810	18S pre-ribosomal assembly protein gar2-related	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.94	1619124_at	CB979012	-	-	1e+0	At1g08220	-	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.95	1612087_at	CB339591	-	-	2e+0	At2g28140	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.93	1611417_at	CF203238.1	-	-	3e-2	At1g30795	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM436361	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.0	94.2	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.7	93.0	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.4	91.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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