Co-expression analysis

Gene ID 1617225_at
Gene name hypothetical protein LOC100245147
Homology with ArabidopsisSimilar to At2g18870: VEL3 (VERNALIZATION5/VIN3-LIKE) (HF=3e-1)
Module size 6 genes
NF 0.18
%ile 26.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.961617225_atBQ798495hypothetical protein LOC100245147-3e-1At2g18870VEL3 (VERNALIZATION5/VIN3-LIKE)O.I.H.G.S.X.
0.5577.30.961622320_atCF514116--2e+1At5g05113unknown proteinO.I.H.G.S.X.
0.1515.60.971615347_atCF518500hypothetical protein LOC100243052-2e-20At3g54300ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727)O.I.H.G.S.X.
0.1212.10.981606481_atCF403961hypothetical protein LOC100265434-2e-1At5g30500galactinol synthase, putativeO.I.H.G.S.X.
0.1111.30.971620116_atCF210995hypothetical protein LOC100262620-3e-4At5g47140zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.077.80.97AFFX-r2-Ec-bioD-5_at---O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436378Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13Link to GEO
2.088.2GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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