Co-expression analysis

Gene ID 1617206_s_at
Gene name hypothetical protein LOC100244962
Homology with ArabidopsisSimilar to At5g67600: unknown protein (HF=8e-1)
Module size 6 genes
NF 0.90
%ile 99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.991617206_s_atCB340600hypothetical protein LOC100244962-8e-1At5g67600unknown proteinO.I.H.G.S.X.
0.9198.80.991611924_atCA817406hypothetical protein LOC100244683-2e-9At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.8394.60.981608822_atCF211356hypothetical protein LOC100246732-8e-6At3g46780PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE 16)O.I.H.G.S.X.
0.8394.60.991613642_atCB002851hypothetical protein LOC100244962-9e-18At1g08380PSAO (photosystem I subunit O)O.I.H.G.S.X.
0.7390.80.991613266_atCA815997hypothetical protein LOC100250168-2e+0At3g16690nodulin MtN3 family proteinO.I.H.G.S.X.
0.6787.90.991615822_atCF208321hypothetical protein LOC100260599-3e-92At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.9GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.294.9GSM436365Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.893.4GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.289.9GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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