Co-expression analysis

Gene ID 1617192_at
Gene name class IV chitinase
Homology with ArabidopsisSimilar to At2g43570: chitinase, putative (HF=4e-2)
Module size 18 genes
NF 0.50
%ile 75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.811617192_atAY137377.1class IV chitinase-4e-2At2g43570chitinase, putativeO.I.H.G.S.X.
0.6787.90.951616445_atCD716014hypothetical protein LOC100262839-1e+0At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.6283.30.891615581_atCB973651--1e+0At1g29540unknown proteinO.I.H.G.S.X.
0.6081.90.891607475_s_atCD012393O-methyltransferase-like-6e-6At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.H.G.S.X.
0.5679.40.871609218_atBM437324--3e-1At4g40030histone H3.2O.I.H.G.S.X.
0.5475.70.881620342_atCF207053.1O-methyltransferase-like-3e-5At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.H.G.S.X.
0.5475.70.951607058_atCF372471hypothetical protein LOC100251716-7e-5At2g46110KPHMT1 (KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1)O.I.H.G.S.X.
0.5375.20.951617355_atCF604658hypothetical protein LOC100251716-9e-23At3g61530PANB2O.I.H.G.S.X.
0.5375.20.911612722_atCF372454hypothetical protein LOC100264158-2e+0At4g1810060S ribosomal protein L32 (RPL32A)O.I.H.G.S.X.
0.5375.20.851611385_atCF206354.1--1e+1At3g02540RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)O.I.H.G.S.X.
0.5375.20.871613344_atCF202628.1--4e+0At5g17650glycine/proline-rich proteinO.I.H.G.S.X.
0.5173.20.911610800_atCF204250.1--2e+0At2g35370GDCHO.I.H.G.S.X.
0.4564.60.871622670_s_atCF207059.1hypothetical protein LOC100242012-1e+1At5g05590PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2)O.I.H.G.S.X.
0.4158.70.921615458_atCB969727hypothetical protein LOC100255664-2e+0At5g16490RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)O.I.H.G.S.X.
0.4057.70.891609744_atCF203760.1hypothetical protein LOC100240811 /// hypothetical protein LOC100263073-2e+0At3g42630pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3751.70.891614141_atCA817693hypothetical protein LOC100265131-1e-9At2g31090unknown proteinO.I.H.G.S.X.
0.3548.50.871610363_atCB979583hypothetical protein LOC100267452-9e-32At3g62150PGP21 (P-GLYCOPROTEIN 21)O.I.H.G.S.X.
0.2937.70.891607713_s_atAF487826.1serine hydrolase-like-1e-1At4g26210mitochondrial ATP synthase g subunit family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.591.9GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.784.7GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
1.784.7GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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