Co-expression analysis

Gene ID 1617089_at
Gene name
Homology with ArabidopsisSimilar to At5g67190: AP2 domain-containing transcription factor, putative (HF=4e+0)
Module size 27 genes
NF 0.24
%ile 34.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8594.90.951617089_atCB969922--4e+0At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.5475.70.971611191_atCF207954hypothetical protein LOC100264622-1e-60At5g11850protein kinase family proteinO.I.H.G.S.X.
0.4361.50.961611699_atCB008620hypothetical protein LOC100245230-6e+0At4g26420GAMT1O.I.H.G.S.X.
0.4158.70.981618802_s_atCF205022.1hypothetical protein LOC100264326-9e-4At1g34780ATAPRL4 (APR-like 4)O.I.H.G.S.X.
0.3548.50.971615754_atCF213398--3e-41At5g65470unknown proteinO.I.H.G.S.X.
0.3039.40.971609109_atCB922980hypothetical protein LOC100249946-3e-2At1g05720selenoprotein family proteinO.I.H.G.S.X.
0.3039.40.981612818_atCF414592hypothetical protein LOC100265822-6e-33At1g51060HTA10O.I.H.G.S.X.
0.2937.70.971610599_atCF211001hypothetical protein LOC100250338-7e+0At5g16790-O.I.H.G.S.X.
0.2937.70.971615991_s_atCF404409hypothetical protein LOC100241833-1e-22At4g38130HD1 (HISTONE DEACETYLASE 1)O.I.H.G.S.X.
0.2632.00.971612309_atCB342376hypothetical protein LOC100245361 /// hypothetical protein LOC100263480-7e-2At2g37195unknown proteinO.I.H.G.S.X.
0.2632.00.981609466_atCD797661hypothetical protein LOC100262838-3e-61At5g65270AtRABA4a (Arabidopsis Rab GTPase homolog A4a)O.I.H.G.S.X.
0.2632.00.981620765_atCF215290hypothetical protein LOC100266143-2e-124At1g20090ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)O.I.H.G.S.X.
0.2530.50.971617131_atCF511594hypothetical protein LOC100242326-2e+0At1g54095unknown proteinO.I.H.G.S.X.
0.2428.70.971617625_atCB006850hypothetical LOC100246722-2e-6At3g05680EMB2016 (embryo defective 2016)O.I.H.G.S.X.
0.2124.00.971615568_s_atCF415266hypothetical protein LOC100242512-2e-2At3g04470-O.I.H.G.S.X.
0.2022.40.971606661_atCD004606hypothetical protein LOC100246447-2e+0At5g08050-O.I.H.G.S.X.
0.1819.40.981614103_atCF515571hypothetical protein LOC100257061-2e-2At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.1819.40.981616651_atBQ796747hypothetical protein LOC100263083-1e-12At1g09270IMPA-4 (IMPORTIN ALPHA ISOFORM 4)O.I.H.G.S.X.
0.1819.40.981611111_atCF207166hypothetical protein LOC100256502-3e-33At1g63500ATP binding / binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.1718.20.981619145_s_atCB969125hypothetical protein LOC100250496-6e-36At2g27050EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1)O.I.H.G.S.X.
0.1616.70.981619905_atCF404235hypothetical protein LOC100263242-2e-1At2g34160nucleic acid bindingO.I.H.G.S.X.
0.1515.60.991613129_atCB970410hypothetical protein LOC100266068-2e-13At4g17330ATG2484-1O.I.H.G.S.X.
0.1515.60.971616913_atBQ796394hypothetical protein LOC100250143-7e-2At5g05570transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.1515.60.971619154_atCF212140hypothetical protein LOC100246237-1e-7At4g25770unknown proteinO.I.H.G.S.X.
0.1414.40.961612201_atCF404051hypothetical protein LOC100266189-7e-5At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.1313.30.971609452_atBQ794280hypothetical protein LOC100249768-3e-1At4g31460ribosomal protein L28 family proteinO.I.H.G.S.X.
0.1212.10.981622789_x_atCF206467.1--4e+1At5g53590auxin-responsive family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM436416V. riparia (VR, PI588259) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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