Co-expression analysis

Gene ID	1617088_at
Gene name	hypothetical protein LOC100245381
Homology with Arabidopsis	Similar to At4g35230: BSK1 (BR-SIGNALING KINASE 1) (HF=1e-31)
Module size	10 genes
NF	0.47
%ile	70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.69	88.3	0.98	1617088_at	BQ797725	hypothetical protein LOC100245381	-	1e-31	At4g35230	BSK1 (BR-SIGNALING KINASE 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1614103_at	CF515571	hypothetical protein LOC100257061	-	2e-2	At3g12140	emsy N terminus domain-containing protein / ENT domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1619145_s_at	CB969125	hypothetical protein LOC100250496	-	6e-36	At2g27050	EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1615691_at	CF511397	hypothetical protein LOC100251732	-	9e-56	At4g03430	EMB2770 (EMBRYO DEFECTIVE 2770)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1614563_at	BQ800083	hypothetical protein LOC100250772	-	1e-10	At1g22280	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1611180_at	BQ795485	hypothetical protein LOC100263350	-	5e+0	At3g28455	CLE25 (CLAVATA3/ESR-RELATED 25)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1608789_at	CF207355	hypothetical protein LOC100258912	-	2e-16	At2g47070	SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1613738_at	CB343644	hypothetical protein LOC100265879	-	6e-1	At3g25420	scpl21 (serine carboxypeptidase-like 21)	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.99	1613129_at	CB970410	hypothetical protein LOC100266068	-	2e-13	At4g17330	ATG2484-1	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.99	1607202_s_at	CD797631	hypothetical protein LOC100242295	-	2e-65	At5g23090	NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.1	89.1	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147676	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	5
1.9	87.2	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2
1.9	87.2	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
1.8	86.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.8	86.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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