Co-expression analysis

Gene ID 1617074_s_at
Gene name similar to Os04g0237300 /// similar to RNA polymerase alpha subunit /// similar to RNA polymerase alpha subunit
Homology with ArabidopsisSimilar to Atcg00750: - (HF=3e-128)
Module size 6 genes
NF 0.67
%ile 92.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.10.961617074_s_atCF204027.1similar to Os04g0237300 /// similar to RNA polymerase alpha subunit /// similar to RNA polymerase alpha subunit-3e-128Atcg00750-O.I.H.G.S.X.
0.8394.60.971614676_s_atBQ793152ATP synthase subunit a, chloroplastic-0Atcg00120-O.I.H.G.S.X.
0.7390.80.971614408_atCB978599--5e-25Atcg01130-O.I.H.G.S.X.
0.6787.90.971614922_atCA816734--2e-12Atcg00050-O.I.H.G.S.X.
0.6787.90.971618524_x_atCF202257.1--7e+0At3g57840self-incompatibility protein-relatedO.I.H.G.S.X.
0.5072.70.971611270_s_atCF213958--1e-52Atcg00070-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.993.8GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.591.9GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.390.7GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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