Co-expression analysis

Gene ID	1617058_s_at
Gene name	hypothetical protein LOC100246864
Homology with Arabidopsis	Similar to At5g04130: DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative (HF=4e+0)
Module size	6 genes
NF	0.21
%ile	29.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1617058_s_at	CA813874	hypothetical protein LOC100246864	-	4e+0	At5g04130	DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1617485_at	CF209626	-	-	2e-8	At5g66080	protein phosphatase 2C family protein / PP2C family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1620284_at	CA817004	hypothetical protein LOC100249470	-	1e-17	At4g35220	cyclase family protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.98	1616919_s_at	CF516508	hypothetical protein LOC100253219	-	6e-15	At1g15250	60S ribosomal protein L37 (RPL37A)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.98	1617136_s_at	CF214297	hypothetical protein LOC100246159	-	2e-58	At4g16720	60S ribosomal protein L15 (RPL15A)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.98	1618475_at	CB009301	hypothetical protein LOC100261048	-	2e-2	At3g15610	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	99.4	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
4.5	97.5	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
4.5	97.5	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
4.4	97.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
4.1	96.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.0	96.7	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.0	96.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.9	96.6	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.6	96.0	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.5	95.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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