Co-expression analysis

Gene ID 1617046_at
Gene name hypothetical protein LOC100244517
Homology with ArabidopsisSimilar to At1g68160: unknown protein (HF=2e-1)
Module size 10 genes
NF 0.55
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4361.50.951617046_atCF512505hypothetical protein LOC100244517-2e-1At1g68160unknown proteinO.I.H.G.S.X.
0.7390.80.961609341_s_atCF202467.1hypothetical protein LOC100265359-2e-3At5g40630ubiquitin family proteinO.I.H.G.S.X.
0.6787.90.961607300_atCF206446.1--9e-51At2g47650UXS4 (UDP-XYLOSE SYNTHASE 4)O.I.H.G.S.X.
0.5980.60.971618973_s_atCF204369.1hypothetical protein LOC100267103-1e+0At3g61560reticulon family protein (RTNLB6)O.I.H.G.S.X.
0.5879.80.961620264_x_atCF201907.1--2e-1At5g10860CBS domain-containing proteinO.I.H.G.S.X.
0.5679.40.971621187_s_atCF201896.1--8e+0At5g50345-O.I.H.G.S.X.
0.5375.20.971609907_x_atCF201896.1--8e+0At5g50345-O.I.H.G.S.X.
0.4464.10.961609380_x_atCF203033.1--8e-10At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.4361.50.971609196_atBQ792412hypothetical protein LOC100256073-3e-1At3g14020NF-YA6 (NUCLEAR FACTOR Y, SUBUNIT A6)O.I.H.G.S.X.
0.4057.70.961608451_atCF205526.1--5e-22At3g25220FKBP15-1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.390.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.189.1GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.987.2GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
1.886.0GSM436383Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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