Co-expression analysis

Gene ID	1616984_at
Gene name	hypothetical protein LOC100258748
Homology with Arabidopsis	Similar to At2g36900: MEMB11 (MEMBRIN 11) (HF=1e-7)
Module size	9 genes
NF	0.30
%ile	43.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	91.5	0.97	1616984_at	CD798634	hypothetical protein LOC100258748	-	1e-7	At2g36900	MEMB11 (MEMBRIN 11)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1617376_at	BQ792638	hypothetical protein LOC100250911	-	2e-3	At4g12760	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.97	1613353_at	CA809236	hypothetical protein LOC100265492	-	4e-86	At4g01370	ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1614918_at	CD719639	similar to glycoside hydrolase family 47 protein	-	6e-12	At1g30000	glycoside hydrolase family 47 protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1622261_at	BQ798242	hypothetical protein LOC100245316	-	5e-34	At1g29850	double-stranded DNA-binding family protein	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1621416_at	CF514904	hypothetical protein LOC100263998	-	5e-94	At1g49300	RABG3E (RAB GTPASE HOMOLOG G3E)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1618436_at	CD801488	hypothetical protein LOC100251351	-	9e-1	At4g03945	enzyme inhibitor/ pectinesterase	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.97	1620602_at	BQ796987	hypothetical protein LOC100250131	-	2e-47	At5g01960	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.97	1608288_at	CD712676	hypothetical protein LOC100257215	-	3e-14	At2g16090	zinc finger protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.7	GSM147684	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	13
3.1	94.6	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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