Co-expression analysis

Gene ID	1616949_at
Gene name	hypothetical protein LOC100250114
Homology with Arabidopsis	Similar to At5g53170: FTSH11 (FtsH protease 11) (HF=2e-34)
Module size	6 genes
NF	0.54
%ile	79.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	75.2	0.97	1616949_at	CF519047	hypothetical protein LOC100250114	-	2e-34	At5g53170	FTSH11 (FtsH protease 11)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1611605_s_at	CF371905	hypothetical protein LOC100257686	-	2e-3	At2g31050	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.97	1615791_s_at	CA809329	hypothetical protein LOC100260183	-	2e-37	At2g45990	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1615234_at	CB342968	hypothetical protein LOC100258729	-	3e-17	At1g54350	ABC transporter family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1607125_at	CB342111	hypothetical protein LOC100242557	-	8e-2	At5g26820	ATIREG3 (IRON-REGULATED PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1615149_at	CD009120	hypothetical protein LOC100248175	-	4e+0	At5g64200	ATSC35	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.5	91.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.4	91.3	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
2.2	89.9	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.2	89.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.1	89.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.0	88.2	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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