Co-expression analysis

Gene ID 1616898_at
Gene name hypothetical protein LOC100250567
Homology with ArabidopsisSimilar to At5g46013: unknown protein (HF=4e-1)
Module size 11 genes
NF 0.81
%ile 98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5879.80.891616898_atBQ796057hypothetical protein LOC100250567-4e-1At5g46013unknown proteinO.I.H.G.S.X.
0.9095.60.941608122_atCB982493hypothetical protein LOC100241637-4e-1At4g36100-O.I.H.G.S.X.
0.8695.10.941617756_atCB981493hypothetical protein LOC100253194-2e+1At5g57560TCH4 (Touch 4)O.I.H.G.S.X.
0.8494.80.951620959_s_atCB915151myb-relared transcription factor VvMYBA2-4e+0At5g19855unknown proteinO.I.H.G.S.X.
0.8494.80.951615798_atAB073013.1--1e-5At1g66370MYB113 (myb domain protein 113)O.I.H.G.S.X.
0.8293.90.921617171_s_atAF000371.1UDP glucose:flavonoid 3-o-glucosyltransferase-1e-2At5g17030UGT78D3 (UDP-GLUCOSYL TRANSFERASE 78D3)O.I.H.G.S.X.
0.8093.60.941616413_atAF003007.1VVTL1-4e-5At4g11650ATOSM34 (osmotin 34)O.I.H.G.S.X.
0.7892.60.941610071_atBQ797708hypothetical protein LOC100253046-2e-4At1g65680ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)O.I.H.G.S.X.
0.7892.60.951618296_s_atCD711959--1e+0At2g01275zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7390.80.941611457_atCD711959--1e+0At2g01275zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7088.60.931613811_a_atCB920849VVTL1-5e-13At1g07720KCS3 (3-KETOACYL-COA SYNTHASE 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.399.6GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
4.397.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.893.4GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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