Co-expression analysis

Gene ID 1616855_at
Gene name
Homology with ArabidopsisSimilar to At5g24010: protein kinase family protein (HF=9e-15)
Module size 19 genes
NF 0.17
%ile 25.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6888.00.911616855_atCD003909--9e-15At5g24010protein kinase family proteinO.I.H.G.S.X.
0.3853.60.951617721_atCF568847--1e-76At5g56030HSP81-2 (HEAT SHOCK PROTEIN 81-2)O.I.H.G.S.X.
0.3446.80.951617607_atCB918932--3e-2At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)O.I.H.G.S.X.
0.3446.80.951613291_atCF972323.1--4e-4At3g13410unknown proteinO.I.H.G.S.X.
0.3243.10.951622616_atCB006094--4e-1At5g42080ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN)O.I.H.G.S.X.
0.2530.50.971614482_atCF206009.1hypothetical protein LOC100241833-2e-21At4g38130HD1 (HISTONE DEACETYLASE 1)O.I.H.G.S.X.
0.2530.50.941618975_atCD006441--4e-4At1g55680WD-40 repeat family proteinO.I.H.G.S.X.
0.2327.50.971618512_atBQ795722hypothetical protein LOC100252904-5e-7At5g06330hairpin-responsive protein, putative (HIN1)O.I.H.G.S.X.
0.2022.40.951620813_atBQ800573hypothetical protein LOC100245718-2e-8At4g32600zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1819.40.981609966_a_atBQ798735hypothetical protein LOC100249980 /// hypothetical protein LOC100245503-3e-1At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)O.I.H.G.S.X.
0.1819.40.961614588_s_atCF406014hypothetical protein LOC100253521-8e-2At3g12100cation efflux family protein / metal tolerance protein, putativeO.I.H.G.S.X.
0.1718.20.951621365_atCK136934.1--9e-69At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.1616.70.971609077_atCF606671hypothetical protein LOC100264912-3e-13At5g16050GRF5 (GENERAL REGULATORY FACTOR 5)O.I.H.G.S.X.
0.1414.40.961619876_atAF176496.1--7e-13At1g09640elongation factor 1B-gamma, putative / eEF-1B gamma, putativeO.I.H.G.S.X.
0.1010.30.951619308_atBQ795842hypothetical protein LOC100251904 /// hypothetical protein LOC100248513-4e-13At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X. family proteinO.I.H.G.S.X. protein LOC100263316-2e+0At3g14080small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.088.2GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.987.2GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
1.886.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.886.0GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.886.0GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
1.886.0GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.683.3GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.683.3GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.581.7GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
1.581.7GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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