Co-expression analysis

Gene ID 1616852_at
Gene name
Homology with ArabidopsisSimilar to At4g23780: unknown protein (HF=5e-2)
Module size 20 genes
NF 0.40
%ile 60.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6988.30.971616852_atBQ796225--5e-2At4g23780unknown proteinO.I.H.G.S.X.
0.5879.80.981617631_atCD798963hypothetical protein LOC100264042-8e-9At2g42210mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.5779.80.981617343_s_atCB972670--4e+0At5g65870ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)O.I.H.G.S.X.
0.5577.30.981621653_s_atCB974156hypothetical protein LOC100261248-4e-17At5g25757unknown proteinO.I.H.G.S.X.
0.5375.20.981607156_atCD801776hypothetical protein LOC100248126-2e-2At4g21150HAP6 (HAPLESS 6)O.I.H.G.S.X.
0.4767.70.981606938_atCD802354hypothetical protein LOC100265256-4e-72At1g52740HTA9 (HISTONE H2A PROTEIN 9)O.I.H.G.S.X.
0.4464.10.981618016_atCB350120hypothetical protein LOC100247325-3e-1At5g35740glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.4361.50.981615783_s_atCA818556hypothetical protein LOC100248438-2e-19At2g40060protein binding / structural moleculeO.I.H.G.S.X.
0.4260.10.981619506_s_atCB981155hypothetical protein LOC100250330-4e-5At2g16595-O.I.H.G.S.X.
0.4158.70.981619577_atCF213082hypothetical protein LOC100266782-1e+0At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)O.I.H.G.S.X.
0.4158.70.981607485_atCB348540hypothetical protein LOC100260580-4e-9At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.3853.60.981620509_atCF213694hypothetical protein LOC100248585-2e-21At4g39220ATRER1AO.I.H.G.S.X.
0.3548.50.981613861_atBQ797310hypothetical protein LOC100241344-1e+0At1g57565-O.I.H.G.S.X.
0.3243.10.981609633_s_atCB971333hypothetical protein LOC100254082-3e-1At4g15735SCRL10 (SCR-Like 10)O.I.H.G.S.X.
0.3039.40.981607235_atCB340942hypothetical protein LOC100259188-7e-1At4g09620-O.I.H.G.S.X.
0.3039.40.981612579_atBQ799205hypothetical protein LOC100267098-5e-4At3g52760integral membrane Yip1 family proteinO.I.H.G.S.X.
0.2837.70.981613685_atCB980412hypothetical protein LOC100251936-3e-7At3g20890RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.2837.70.981618133_atCF404967hypothetical protein LOC100259114-2e-1At5g28610-O.I.H.G.S.X.
0.2734.00.981607448_a_atCB976317hypothetical protein LOC100249185-1e+0At1g02130ARA-5 (ARABIDOPSIS RAS 5)O.I.H.G.S.X.
0.2327.50.981608788_atCF414358hypothetical protein LOC100244969-2e-5At5g65250unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.099.5GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.581.7GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.479.9GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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