Co-expression analysis

Gene ID 1616843_at
Gene name hypothetical protein LOC100252068
Homology with ArabidopsisSimilar to At4g18460: D-Tyr-tRNA(Tyr) deacylase family protein (HF=7e-17)
Module size 12 genes
NF 0.49
%ile 74.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.971616843_atCF606887hypothetical protein LOC100252068-7e-17At4g18460D-Tyr-tRNA(Tyr) deacylase family proteinO.I.H.G.S.X.
0.7892.60.981615727_atCF205417.1hypothetical protein LOC100261981-9e-2At4g31470pathogenesis-related protein, putativeO.I.H.G.S.X.
0.7289.70.971620211_atCF513911hypothetical protein LOC100261483-1e+0At3g07565DNA bindingO.I.H.G.S.X.
0.7088.60.981616023_atCB979152hypothetical protein LOC100252512-1e-38At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.6183.20.971622086_atCF207289hypothetical protein LOC100265288-1e-1At2g20480unknown proteinO.I.H.G.S.X.
0.5980.60.971614958_atCB347627hypothetical protein LOC100241674-2e-6At5g130505-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)O.I.H.G.S.X.
0.5879.80.971620802_atCB976446similar to putative pyruvate dehydrogenase E1 alpha subunit-3e-89At1g01090PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA)O.I.H.G.S.X.
0.5679.40.981609080_atBQ797210hypothetical protein LOC100265018-9e-21At5g54440unknown proteinO.I.H.G.S.X.
0.3650.70.971608770_atCF211789--6e-21At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.3650.70.981615943_atCB971749hypothetical protein LOC100266273-5e-14At1g51980mitochondrial processing peptidase alpha subunit, putativeO.I.H.G.S.X.
0.3141.30.981619028_atCF205704.1hypothetical protein LOC100248919-3e-26At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.2937.70.971608272_atBQ796860hypothetical protein LOC100255032-3e-36At3g56190ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.497.3GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.692.5GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.289.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.088.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.088.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.088.2GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.088.2GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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