Co-expression analysis

Gene ID 1616828_s_at
Gene name similar to Os03g0670700
Homology with ArabidopsisSimilar to At4g38680: GRP2 (GLYCINE RICH PROTEIN 2) (HF=1e+0)
Module size 7 genes
NF 0.14
%ile 22.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.951616828_s_atCD799685similar to Os03g0670700-1e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.5779.80.941621554_s_atCF511998similar to Os03g0670700-4e-6At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)O.I.H.G.S.X.
0.2225.60.951616273_atCB004363hypothetical protein LOC100252917-6e+0At5g49410unknown proteinO.I.H.G.S.X.
0.1414.40.961620042_atCF514775hypothetical protein LOC100243431-3e-76At2g47390serine-type endopeptidase/ serine-type peptidaseO.I.H.G.S.X.
0.077.80.951620607_s_atCB910956hypothetical protein LOC100259713-1e-1At2g47890zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.077.80.951617861_atCB340880hypothetical protein LOC100258495-3e-5At2g37510RNA-binding protein, putativeO.I.H.G.S.X.
0.066.80.951621317_atCF514922similar to F10B6.22-2e-27At1g14810semialdehyde dehydrogenase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
3.395.2GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
3.294.9GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.194.6GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.194.6GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.094.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.993.8GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.993.8GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.893.4GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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