Co-expression analysis

Gene ID 1616809_at
Gene name hypothetical protein LOC100253004
Homology with ArabidopsisSimilar to At3g19800: unknown protein (HF=2e-6)
Module size 9 genes
NF 0.44
%ile 66.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8995.50.961616809_atCD801686hypothetical protein LOC100253004-2e-6At3g19800unknown proteinO.I.H.G.S.X.
0.7892.60.961613448_atBQ799182hypothetical protein LOC100259397-3e-13At4g13250short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.5072.70.961616148_atBQ800532hypothetical protein LOC100255531-1e+0At1g58480-O.I.H.G.S.X.
0.5072.70.971621474_atCF372414hypothetical protein LOC100251060-6e-26At5g26742emb1138 (embryo defective 1138)O.I.H.G.S.X.
0.4057.70.971614308_atCF211114hypothetical protein LOC100265443-2e-37At5g48470unknown proteinO.I.H.G.S.X.
0.4057.70.971617213_atCF415076hypothetical protein LOC100259443-2e-39At2g01110APG2 (ALBINO AND PALE GREEN 2)O.I.H.G.S.X.
0.3751.70.971614814_s_atCB345895hypothetical protein LOC100267103-5e-13At2g47400CP12-1O.I.H.G.S.X.
0.3243.10.961618087_atBQ797216similar to RelA-SpoT like protein RSH1-5e+0At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)O.I.H.G.S.X.
0.2327.50.961615304_atCB341428hypothetical protein LOC100252706-3e-11At4g02790GTP-binding family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.0GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.094.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
2.591.9GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.390.7GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
2.289.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.289.9GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.189.1GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage