Co-expression analysis

Gene ID	1616792_at
Gene name	hypothetical protein LOC100257755
Homology with Arabidopsis	Similar to At5g02240: binding / catalytic/ coenzyme binding (HF=4e+0)
Module size	8 genes
NF	0.26
%ile	36.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.92	1616792_at	CD801227	hypothetical protein LOC100257755	-	4e+0	At5g02240	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.94	1610996_at	BQ794786	pectinesterase	-	2e-9	At1g53840	ATPME1	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1620930_s_at	CF212327	hypothetical protein LOC100249678	-	1e-150	At3g46440	UXS5	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.94	1612958_at	CF512608	hypothetical protein LOC100249570	-	3e-14	At1g64460	phosphatidylinositol 3- and 4-kinase family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.93	1616299_at	CB979735	hypothetical LOC100241800	-	1e+0	At3g51440	strictosidine synthase family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.94	1606781_at	BQ796322	hypothetical protein LOC100257470	-	5e-6	At5g45600	GAS41	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.94	1612103_at	CF212327	hypothetical protein LOC100249678	-	1e-150	At3g46440	UXS5	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.94	1613036_at	CB980253	hypothetical protein LOC100260380	-	2e-3	At1g10200	WLIM1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	97.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.9	87.2	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.8	86.0	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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