Co-expression analysis

Gene ID 1616667_a_at
Gene name similar to ribosomal protein L29 family protein /// hypothetical protein LOC100259766
Homology with ArabidopsisSimilar to At5g65220: ribosomal protein L29 family protein (HF=7e-5)
Module size 6 genes
NF 0.62
%ile 89.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.991616667_a_atCB343534similar to ribosomal protein L29 family protein /// hypothetical protein LOC100259766-7e-5At5g65220ribosomal protein L29 family proteinO.I.H.G.S.X.
0.6384.30.981613550_atCF519120hypothetical protein LOC100255002-1e-1At5g19240unknown proteinO.I.H.G.S.X.
0.5577.30.991612544_atBQ793854hypothetical protein LOC100260093-5e-13At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)O.I.H.G.S.X.
0.5577.30.991613405_atCF413625hypothetical protein LOC100250386-5e-28At3g62030peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)O.I.H.G.S.X.
0.4057.70.991606900_atCA816931hypothetical protein LOC100254016-4e-16At5g1432030S ribosomal protein S13, chloroplast (CS13)O.I.H.G.S.X.
0.3650.70.991620854_atCA818411hypothetical protein LOC100258321-7e-12At1g29070ribosomal protein L34 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.796.2GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.696.0GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.993.8GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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