Co-expression analysis

Gene ID 1616640_s_at
Gene name hypothetical protein LOC100248388
Homology with ArabidopsisSimilar to At1g79260: unknown protein (HF=7e-6)
Module size 6 genes
NF 0.42
%ile 62.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.971616640_s_atCB969696hypothetical protein LOC100248388-7e-6At1g79260unknown proteinO.I.H.G.S.X.
0.5072.70.971611012_atCA816762hypothetical protein LOC100264980-4e-4At5g57580calmodulin-binding proteinO.I.H.G.S.X.
0.4057.70.961617170_atCF403242hypothetical protein LOC100243828 /// hypothetical protein LOC100254631-7e-16At3g07370CHIP (CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN)O.I.H.G.S.X.
0.3650.70.971611232_s_atCF510701hypothetical protein LOC100268014-5e+0At5g10810ATERO.I.H.G.S.X.
0.3141.30.971621582_atCB007952hypothetical protein LOC100256349-1e-35At5g48370thioesterase family proteinO.I.H.G.S.X.
0.1920.90.971614412_s_atCB971898hypothetical protein LOC100243985-5e-1At3g17160unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.8GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.297.1GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.196.9GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.094.2GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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