Co-expression analysis

Gene ID	1616636_at
Gene name	hypothetical protein LOC100262356
Homology with Arabidopsis	Similar to At2g41750: DTW domain-containing protein (HF=7e-1)
Module size	6 genes
NF	0.34
%ile	49.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	75.2	0.92	1616636_at	CF404156	hypothetical protein LOC100262356	-	7e-1	At2g41750	DTW domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.93	1616759_at	BQ799677	hypothetical protein LOC100244675	-	9e-26	At3g18430	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.94	1609840_at	CA809057	-	-	2e+0	At5g41640	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.92	1608361_at	CF517494	hypothetical protein LOC100264929	-	3e-18	At3g26580	-	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.92	1606625_at	CF603972	hypothetical protein LOC100257850	-	1e-1	At2g43590	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.93	1612056_at	BQ795970	hypothetical protein LOC100263511	-	2e-8	At3g02570	MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	99.1	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
6.3	98.8	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.2	97.1	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.5	95.7	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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