Co-expression analysis

Gene ID	1616577_at
Gene name	hypothetical protein LOC100261345
Homology with Arabidopsis	Similar to At3g54620: BZIP25 (BASIC LEUCINE ZIPPER 25) (HF=6e+0)
Module size	6 genes
NF	0.13
%ile	21.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.94	1616577_at	BQ792277	hypothetical protein LOC100261345	-	6e+0	At3g54620	BZIP25 (BASIC LEUCINE ZIPPER 25)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1617090_at	CA808721	hypothetical protein LOC100246523	-	6e-2	At4g16210	ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1613733_at	CB345957	hypothetical protein LOC100243231	-	1e-6	At5g59210	myosin heavy chain-related	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.97	1610777_at	CD797701	hypothetical protein LOC100263956	-	2e-42	At3g13670	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.96	1609774_s_at	CA817625	hypothetical protein LOC100258211	-	2e-34	At5g45130	RHA1 (RAB HOMOLOG 1)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.96	1618905_at	CB339532	hypothetical protein LOC100245830	-	5e-7	At2g25670	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.8	86.0	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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