Co-expression analysis

Gene ID	1616571_at
Gene name
Homology with Arabidopsis	Similar to At5g39645: - (HF=1e+0)
Module size	6 genes
NF	0.15
%ile	23.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.92	1616571_at	CF205416.1	-	-	1e+0	At5g39645	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1614088_at	CF208463	hypothetical protein LOC100258145	-	2e-21	At2g39170	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1619771_s_at	CD798243	geranyl diphosphate synthase	-	1e+0	At5g64350	FKBP12 (FK506-BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.97	1615765_x_at	CF202835.1	-	-	7e-4	At1g55680	WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.98	1622119_s_at	CB915301	hypothetical protein LOC100258911	-	4e-19	At3g04780	-	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.97	1618931_at	CB973378	hypothetical protein LOC100265402	-	2e-31	At3g09840	CDC48 (CELL DIVISION CYCLE 48)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.7	93.0	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436361	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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