Co-expression analysis

Gene ID	1616547_at
Gene name	hypothetical protein LOC100256265
Homology with Arabidopsis	Similar to At5g23230: NIC2 (NICOTINAMIDASE 2) (HF=5e-21)
Module size	6 genes
NF	0.07
%ile	13.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.96	1616547_at	BQ798895	hypothetical protein LOC100256265	-	5e-21	At5g23230	NIC2 (NICOTINAMIDASE 2)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.96	1606695_at	CF403712	hypothetical protein LOC100247470	-	1e+0	At4g23770	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.95	1619272_at	CF373376	hypothetical protein LOC100265908	-	1e-4	At1g29395	COR414-TM1	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.96	1613680_a_at	CB970387	WD repeat 2	-	4e-63	At1g12910	ATAN11 (ANTHOCYANIN11)	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.97	1617445_s_at	CF517231	similar to Hsp70 interacting protein/thioredoxin chimera	-	1e+0	At1g31020	ATO2 (Arabidopsis thioredoxin o2)	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.96	1613777_at	CF404767	-	-	1e+0	At3g04430	anac049 (Arabidopsis NAC domain containing protein 49)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.9	96.6	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.7	96.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.7	96.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.6	96.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.6	96.0	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.2	94.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.9	93.8	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
2.8	93.4	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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