Co-expression analysis

Gene ID 1616522_at
Gene name hypothetical protein LOC100262892
Homology with ArabidopsisSimilar to At3g14310: ATPME3 (HF=2e-8)
Module size 15 genes
NF 0.41
%ile 61.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5679.40.951616522_atCF403905hypothetical protein LOC100262892-2e-8At3g14310ATPME3O.I.H.G.S.X.
0.6384.30.961619847_atCF514271hypothetical protein LOC100261336-1e+0At3g22780TSO1 (CHINESE FOR 'UGLY')O.I.H.G.S.X.
0.5475.70.961607495_atCF607413hypothetical protein LOC100264093-3e-17At4g34160CYCD3O.I.H.G.S.X.
0.5072.70.961608574_atCF414345hypothetical protein LOC100249220-6e-2At3g63095-O.I.H.G.S.X.
0.4868.80.961621574_atCF511059hypothetical protein LOC100241803-3e-2At5g28290ATNEK3 (NIMA-RELATED KINASE3)O.I.H.G.S.X.
0.4260.10.971622084_atCF513595hypothetical protein LOC100256435-1e+0At5g51451unknown proteinO.I.H.G.S.X.
0.4057.70.951620766_atCF609305hypothetical protein LOC100249220-9e-18At1g23000heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.4057.70.961608474_atCF403530hypothetical protein LOC100261256-1e-3At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)O.I.H.G.S.X.
0.3853.60.971616611_atCF404283--2e-1At2g33220-O.I.H.G.S.X.
0.3650.70.971615295_atCF373832hypothetical protein LOC100259092-4e-1At4g08190Ras-related GTP-binding protein, putativeO.I.H.G.S.X.
0.3345.70.951611168_atCF208285hypothetical protein LOC100247366-2e-139At1g50010TUA2O.I.H.G.S.X.
0.3345.70.961611396_atBQ800511hypothetical protein LOC100253893-3e-1At1g05136unknown proteinO.I.H.G.S.X.
0.3243.10.981611516_atCB008162hypothetical protein LOC100262734-2e-5At3g28690protein kinase, putativeO.I.H.G.S.X.
0.3141.30.951618871_atCF510551hypothetical protein LOC100265907-3e-7At4g38660thaumatin, putativeO.I.H.G.S.X.
0.3141.30.961619599_atBQ794450hypothetical protein LOC100243558-4e+0At5g01610unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.088.2GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
1.987.2GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM287892Pink soft berry C11 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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