Co-expression analysis

Gene ID 1616494_at
Gene name
Homology with ArabidopsisSimilar to Atmg00690: - (HF=2e+0)
Module size 8 genes
NF 0.18
%ile 27.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.20.901616494_atCB974636--2e+0Atmg00690-O.I.H.G.S.X.
0.3853.60.961607508_atCF207972hypothetical protein LOC100244517-5e-1At1g13400NUB (NUBBIN)O.I.H.G.S.X.
0.1920.90.951619173_atCF514879hypothetical protein LOC100267228-4e+0Atmg01120-O.I.H.G.S.X.
0.1920.90.951608754_atCB980267--3e-1At4g01430nodulin MtN21 family proteinO.I.H.G.S.X.
0.1718.20.961619332_atCF202464.1hypothetical protein LOC100257476-1e+0Atmg00450-O.I.H.G.S.X.
0.1313.30.941620556_atCF208984hypothetical protein LOC100261914-4e+0At5g63150unknown proteinO.I.H.G.S.X.
0.1313.30.951609019_atCB973371similar to predicted protein-2e-1At3g61250AtMYB17 (myb domain protein 17)O.I.H.G.S.X.
0.1010.30.941613674_atCK138160.1hypothetical protein LOC100261822-1e-25At1g72730eukaryotic translation initiation factor 4A, putative / eIF-4A, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM147685Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation14Link to GEO
2.692.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.591.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.289.9GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.289.9GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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