Co-expression analysis

Gene ID	1616475_at
Gene name	hypothetical protein LOC100243281 /// hypothetical protein LOC100265589
Homology with Arabidopsis	Similar to At4g02830: unknown protein (HF=2e-1)
Module size	6 genes
NF	0.41
%ile	61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.89	1616475_at	CB971048	hypothetical protein LOC100243281 /// hypothetical protein LOC100265589	-	2e-1	At4g02830	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.90	1612648_at	CD798203	hypothetical protein LOC100260257	-	3e-1	At1g42960	-	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.91	1614841_at	CB979453	-	-	6e+0	At5g01610	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.89	1610344_at	BQ796295	hypothetical protein LOC100246080	-	9e-22	At1g21000	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.92	1614805_at	CF207170	-	-	1e+0	At1g48730	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.90	1619325_at	CF211836	hypothetical protein LOC100263459	-	6e-4	At3g14660	CYP72A13	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.6	83.3	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.6	83.3	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.5	81.7	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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