Co-expression analysis

Gene ID	1616450_at
Gene name	hypothetical protein LOC100264578
Homology with Arabidopsis	Similar to At1g48790: mov34 family protein (HF=3e-23)
Module size	6 genes
NF	0.47
%ile	70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.99	1616450_at	BQ797532	hypothetical protein LOC100264578	-	3e-23	At1g48790	mov34 family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1621965_s_at	BQ793756	hypothetical protein LOC100247098	-	8e-36	At5g23540	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1621111_at	BQ798687	hypothetical protein LOC100254821	-	2e+0	At4g33145	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1621155_at	BQ794745	hypothetical protein LOC100248478	-	8e-34	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1613432_at	CF516959	hypothetical protein LOC100244217	-	1e-15	At1g67680	7S RNA binding	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.99	1608865_at	CF514121	hypothetical protein LOC100259987	-	7e-90	At5g38480	GRF3 (GENERAL REGULATORY FACTOR 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.2	94.9	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
3.2	94.9	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2	94.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.9	93.8	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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