Co-expression analysis

Gene ID	1616357_at
Gene name	hypothetical protein LOC100255530
Homology with Arabidopsis	Similar to At2g17220: protein kinase, putative (HF=5e-16)
Module size	7 genes
NF	0.27
%ile	38.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.39	54.9	0.90	1616357_at	CF516994	hypothetical protein LOC100255530	-	5e-16	At2g17220	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.91	1620018_at	CF203824.1	-	-	2e+0	At5g44568	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.91	1615694_at	BQ799849	hypothetical protein LOC100257251	-	1e+0	At5g39670	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.92	1622593_at	CF404412	hypothetical protein LOC100242684	-	2e+0	At3g11820	SYP121 (SYNTAXIN OF PLANTS 121)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.90	1617093_at	CF519144	hypothetical protein LOC100241671	-	4e+0	At1g70700	TIFY7	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.91	1613840_at	BQ800291	ABC transporter-like	-	6e-7	At1g15520	PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.92	1618804_at	CF605303	-	-	5e+0	At5g14370	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.1	89.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.1	89.1	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.0	88.2	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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