Co-expression analysis

Gene ID	1616354_at
Gene name	hypothetical protein LOC100251981
Homology with Arabidopsis	Similar to At2g24590: splicing factor, putative (HF=6e-6)
Module size	6 genes
NF	0.56
%ile	83.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.98	1616354_at	CB913437	hypothetical protein LOC100251981	-	6e-6	At2g24590	splicing factor, putative	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.99	1614100_s_at	CB974135	hypothetical protein LOC100256218	-	7e-34	At4g21110	G10 family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.99	1613996_at	CF373512	hypothetical protein LOC100248626	-	6e-1	At4g34470	ASK12 (ARABIDOPSIS SKP1-LIKE 12)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1616505_a_at	CB981819	hypothetical protein LOC100262120	-	3e+0	At5g38060	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1610785_at	CF207765	hypothetical protein LOC100264332	-	3e-1	At3g61389	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.99	1621324_at	CB916399	-	-	1e-1	At4g27000	ATRBP45C	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	98.2	GSM147702	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	31
4.7	97.7	GSM147689	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	18
3.8	96.4	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
3.7	96.2	GSM147707	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	36
3.5	95.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.5	95.7	GSM147672	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	1
3.4	95.5	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
3.4	95.5	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
3.0	94.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.9	93.8	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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