Co-expression analysis

Gene ID	1616332_at
Gene name	hypothetical protein LOC100259445
Homology with Arabidopsis	Similar to At4g27660: unknown protein (HF=2e-1)
Module size	10 genes
NF	0.39
%ile	58.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	79.4	0.98	1616332_at	CF210511	hypothetical protein LOC100259445	-	2e-1	At4g27660	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.99	1615783_s_at	CA818556	hypothetical protein LOC100248438	-	2e-19	At2g40060	protein binding / structural molecule	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1618310_s_at	CF210664	hypothetical protein LOC100259803	-	1e-1	At3g01970	WRKY45	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1607178_at	CD801946	hypothetical protein LOC100259500	-	1e-40	At3g50000	CKA2 (CASEIN KINASE II, ALPHA CHAIN 2)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1607448_a_at	CB976317	hypothetical protein LOC100249185	-	1e+0	At1g02130	ARA-5 (ARABIDOPSIS RAS 5)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.98	1619708_at	CK138171.1	hypothetical protein LOC100256723	-	2e-36	At1g17730	VPS46.1 (VACUOLAR PROTEIN SORTING 46.1)	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	1618016_at	CB350120	hypothetical protein LOC100247325	-	3e-1	At5g35740	glycosyl hydrolase family protein 17	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1621212_at	BQ794170	hypothetical protein LOC100260205	-	7e-5	At4g12790	ATP-binding family protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.98	1615590_at	CA811170	-	-	1e+0	At5g02650	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.98	1620279_at	CB923067	hypothetical protein LOC100255680	-	1e+0	At3g06870	proline-rich family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.1	94.6	GSM436366	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.9	93.8	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.3	90.7	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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