Co-expression analysis

Gene ID	1616247_at
Gene name	hypothetical protein LOC100257808
Homology with Arabidopsis	Similar to At1g15920: CCR4-NOT transcription complex protein, putative (HF=4e-1)
Module size	7 genes
NF	0.60
%ile	87.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.95	1616247_at	CF414434	hypothetical protein LOC100257808	-	4e-1	At1g15920	CCR4-NOT transcription complex protein, putative	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1613382_at	CA817041	hypothetical protein LOC100257375	-	4e-13	At1g06690	aldo/keto reductase family protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.95	1612433_at	CB344997	hypothetical protein LOC100260970	-	1e-9	At5g11840	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1620660_at	CF517134	hypothetical protein LOC100259089	-	6e-10	At5g07020	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1615069_at	CA815055	hypothetical protein LOC100257375	-	5e-44	At1g06690	aldo/keto reductase family protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.96	1617311_at	CB344329	hypothetical protein LOC100257045	-	1e-16	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1608611_at	CF216106	hypothetical protein LOC100240873	-	2e-25	At2g48070	RPH1 (RESISTANCE TO PHYTOPHTHORA 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.0	94.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.9	93.8	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.8	93.4	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.7	93.0	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.3	90.7	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.3	90.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.3	90.7	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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