Co-expression analysis

Gene ID	1616187_at
Gene name	hypothetical protein LOC100244812
Homology with Arabidopsis	Similar to At3g42050: vacuolar ATP synthase subunit H family protein (HF=4e+0)
Module size	6 genes
NF	0.37
%ile	53.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.90	1616187_at	CB343719	hypothetical protein LOC100244812	-	4e+0	At3g42050	vacuolar ATP synthase subunit H family protein	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.92	1608947_at	CF609927	hypothetical protein LOC100244812	-	7e-8	At5g04200	AtMC9 (metacaspase 9)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.94	1607955_at	CB978189	hypothetical protein LOC100262411	-	4e-22	At4g01900	GLB1 (GLNB1 HOMOLOG)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.97	1620181_at	CA817405	hypothetical protein LOC100261394	-	2e-16	At5g06130	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.97	1613601_at	CB978458	starch synthase VI	-	5e+0	At5g42630	ATS (ABERRANT TESTA SHAPE)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1621050_at	CD799000	hypothetical protein LOC100263528	-	6e-3	At3g01910	SOX (SULFITE OXIDASE)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
3.6	96.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.4	95.5	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.4	95.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.3	95.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.3	95.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.6	92.5	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.5	91.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.4	91.3	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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