Co-expression analysis

Gene ID	1616181_at
Gene name	hypothetical protein LOC100244265
Homology with Arabidopsis	Similar to At3g08980: signal peptidase I family protein (HF=4e-3)
Module size	6 genes
NF	0.38
%ile	56.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.96	1616181_at	CF414551	hypothetical protein LOC100244265	-	4e-3	At3g08980	signal peptidase I family protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1618505_at	CB345866	hypothetical protein LOC100252411	-	2e-43	At3g61080	fructosamine kinase family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1611400_at	CF510785	hypothetical protein LOC100266087	-	1e+0	At5g30520	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1615220_at	CB340728	hypothetical protein LOC100262100	-	2e-10	At1g27510	-	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.97	1614616_at	CA817956	hypothetical protein LOC100252131	-	5e-12	At4g37200	HCF164	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.97	1606838_at	CB972815	hypothetical protein LOC100268132	-	3e-2	At1g68280	thioesterase-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	98.0	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.8	96.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.5	95.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.3	95.2	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
3.2	94.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.1	94.6	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.5	91.9	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.4	91.3	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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