Co-expression analysis

Gene ID 1616169_at
Gene name hypothetical protein LOC100244482
Homology with ArabidopsisSimilar to At1g72680: cinnamyl-alcohol dehydrogenase, putative (HF=2e-56)
Module size 13 genes
NF 0.25
%ile 35.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.951616169_atCD802101hypothetical protein LOC100244482-2e-56At1g72680cinnamyl-alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.4464.10.981616691_atCD715631similar to phosphatidylserine decarboxylase-1e-29At5g57190PSD2 (phosphatidylserine decarboxylase 2)O.I.H.G.S.X.
0.3345.70.971613120_atCF404918hypothetical LOC100248029-5e-3At1g18810phytochrome kinase substrate-relatedO.I.H.G.S.X.
0.3141.30.971607094_atCD800565similar to 30S ribosomal protein S11, putative-3e+0At2g29700ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1)O.I.H.G.S.X.
0.3039.40.971621866_atCF414716similar to Putative autophagy-related protein 12-8e-33At1g54210ATG12A (AUTOPHAGY 12 A)O.I.H.G.S.X.
0.2734.00.981608047_atCF405221hypothetical protein LOC100267805-1e-5At3g10260reticulon family proteinO.I.H.G.S.X.
0.2225.60.971621716_atBQ792788hypothetical protein LOC100261303-4e+0At2g42395unknown proteinO.I.H.G.S.X.
0.1920.90.971607477_atCB968954hypothetical protein LOC100247294-2e-13At5g66010RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.1920.90.971622662_atCF510959hypothetical protein LOC100249169-1e-47At5g23670LCB2O.I.H.G.S.X.
0.1920.90.971610836_atCF208642hypothetical protein LOC100257386-5e-10At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.
0.1718.20.961614694_atCF209205hypothetical protein LOC100253296-2e+0At5g02620ankyrin repeat family proteinO.I.H.G.S.X.
0.1313.30.971614995_atBQ796323hypothetical protein LOC100267574-4e-10At4g04720CPK21O.I.H.G.S.X. protein LOC100247473-1e-4At4g40000NOL1/NOP2/sun family proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.189.1GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.088.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.987.2GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.886.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.886.0GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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