Co-expression analysis

Gene ID 1616131_at
Gene name similar to Os01g0104000
Homology with ArabidopsisSimilar to At1g11470: - (HF=1e+0)
Module size 9 genes
NF 0.60
%ile 87.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7491.00.981616131_atCB973358similar to Os01g0104000-1e+0At1g11470-O.I.H.G.S.X.
0.7088.60.991613129_atCB970410hypothetical protein LOC100266068-2e-13At4g17330ATG2484-1O.I.H.G.S.X.
0.6484.70.991614710_atCF404864--1e-1At1g53625unknown proteinO.I.H.G.S.X.
0.6384.30.991615901_atCF405787hypothetical protein LOC100248277-5e+0At4g13075RALFL30 (RALF-LIKE 30)O.I.H.G.S.X.
0.5679.40.991617845_atCD800649hypothetical protein LOC100263968-4e-35At2g38630-O.I.H.G.S.X.
0.5577.30.991611483_atCF207449hypothetical protein LOC100253154-7e+0Atmg00320-O.I.H.G.S.X.
0.5072.70.991607726_atCB349094hypothetical protein LOC100262331-8e-25At4g34100protein binding / zinc ion bindingO.I.H.G.S.X.
0.4767.70.991615281_atCD800042hypothetical protein LOC100241659-2e-17At3g26560ATP-dependent RNA helicase, putativeO.I.H.G.S.X.
0.4057.70.991609777_atCF519086hypothetical protein LOC100257098-5e+0At5g44973-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.899.3GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.897.8GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.289.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
2.088.2GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO
1.886.0GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
1.886.0GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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