Co-expression analysis

Gene ID	1616113_at
Gene name	hypothetical protein LOC100265360
Homology with Arabidopsis	Similar to At4g17180: glycosyl hydrolase family 17 protein (HF=5e-9)
Module size	11 genes
NF	0.16
%ile	24.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.95	99.6	0.96	1616113_at	CB974065	hypothetical protein LOC100265360	-	5e-9	At4g17180	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1617995_a_at	CF512103	hypothetical protein LOC100242505 /// hypothetical protein LOC100262532	-	1e-13	At3g11710	ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1608525_at	CF415433	hypothetical protein LOC100248018	-	3e-12	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1614471_at	BQ792249	hypothetical protein LOC100245854	-	6e+0	At5g26594	ARR24 (Arabidopsis response regulator 24)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1614996_at	CF207591	hypothetical protein LOC100257675	-	2e-17	At1g80680	SAR3 (SUPPRESSOR OF AUXIN RESISTANCE 3)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1618829_at	CD801308	hypothetical protein LOC100245056	-	2e+0	At3g17770	dihydroxyacetone kinase family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1610720_at	CF214229	hypothetical protein LOC100243517	-	2e-15	At5g53800	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.98	1616246_at	CF207965	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.98	1606698_at	CF404442	hypothetical protein LOC100249562	-	4e-1	At5g20550	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.97	1609748_at	CF517439	similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase	-	3e-1	At3g25440	RNA binding	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.97	1608914_at	CB975880	hypothetical protein LOC100259978	-	1e-50	At3g13772	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.2	89.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.1	89.1	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.1	89.1	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
2.0	88.2	GSM147702	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	31
1.9	87.2	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.8	86.0	GSM147736	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	65
1.8	86.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.8	86.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.8	86.0	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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