Co-expression analysis

Gene ID 1616112_at
Gene name hypothetical protein LOC100264343
Homology with ArabidopsisSimilar to At5g47010: LBA1 (LOW-LEVEL BETA-AMYLASE 1) (HF=6e-73)
Module size 6 genes
NF 0.52
%ile 77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.951616112_atCF512953hypothetical protein LOC100264343-6e-73At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.H.G.S.X.
0.5072.70.971607858_atCD719873hypothetical protein LOC100249628-1e-77At4g10730ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.5072.70.981615136_atCF206458.1hypothetical protein LOC100255051-1e-68At1g10290ADL6 (DYNAMIN-LIKE PROTEIN 6)O.I.H.G.S.X.
0.4464.10.961617690_atCA811276hypothetical protein LOC100241678-4e+0At5g01810CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)O.I.H.G.S.X.
0.4464.10.971617653_atCA818371hypothetical protein LOC100260671-5e-2At4g39280phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putativeO.I.H.G.S.X.
0.3853.60.971609415_atCA817605hypothetical protein LOC100254309-2e-62At2g01600epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.591.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.189.1GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.088.2GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.987.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2Link to GEO
1.987.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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