Co-expression analysis

Gene ID 1616111_at
Gene name
Homology with ArabidopsisSimilar to At2g11773: unknown protein (HF=1e-1)
Module size 10 genes
NF 0.11
%ile 18.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.891616111_atCD012364--1e-1At2g11773unknown proteinO.I.H.G.S.X.
0.2734.00.931615557_atCD721452--1e+0At3g57100unknown proteinO.I.H.G.S.X.
0.2124.00.931618733_atCB004465--7e-6At1g66970SVL2 (SHV3-LIKE 2)O.I.H.G.S.X.
0.1819.40.931610470_atCF202637.1--1e-7At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.H.G.S.X.
0.1718.20.931615924_atCD715417--2e-8At3g09970calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.1313.30.941620333_atCF608264--1e-10At3g08020protein binding / zinc ion bindingO.I.H.G.S.X.
0.1111.30.931607040_atCF568797--5e-24At1g54610protein kinase family proteinO.I.H.G.S.X.
0.066.80.941607773_atCD719602--2e-30At5g07290AML4 (ARABIDOPSIS MEI2-LIKE 4)O.I.H.G.S.X.
0.034.20.931612237_atBQ795624--8e-11At4g24240WRKY7O.I.H.G.S.X.
0.023.20.931608414_x_atCF204375.1--2e+0At1g48940plastocyanin-like domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.599.2GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.697.6GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.294.9GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.692.5GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.692.5GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.692.5GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.591.9GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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